Contents:
Detailed results of our experiments when adding noise to phenotypes. S4 Table. Complete list of analysis results for 36 cases of congenital hypothyroidism.
S5 Table. Analysis of congenital hypothyroidism cases with prior diagnosis. S6 Table. Complete list of analysis results for variants with model organism phenotypes but without human phenotypes. References 1. Exome sequencing identifies the cause of a mendelian disorder. Nat Genet.
Strategies for exome and genome sequence data analysis in disease-gene discovery projects. Clin Genet. J Genet Couns. Diagnostic exome sequencing in persons with severe intellectual disability. N Engl J Med. THe promise and challenges of next-generation genome sequencing for clinical care. New England Journal of Medicine. Clinical whole-exome sequencing: are we there yet? Genetics in Medicine. Factors influencing success of clinical genome sequencing across a broad spectrum of disorders. Nature Genetics. PON-P2: prediction method for fast and reliable identification of harmful variants.
PLoS One. Loss-of-function variants in the genomes of healthy humans. Hum Mol Genet.
Analysis of , genomes identifies individuals resilient to severe Mendelian childhood diseases. Nature biotechnology. Characterising and Predicting Haploinsufficiency in the Human Genome.
PLOS Genetics. Cooper GM, Shendure J. Needles in stacks of needles: finding disease-causal variants in a wealth of genomic data. Nat Rev Genet. Moreau Y, Tranchevent LC.
Computational tools for prioritizing candidate genes: boosting disease gene discovery. Nature Reviews: Genetics. A functional SNP in the regulatory region of the decay-accelerating factor gene associates with extraocular muscle pareses in myasthenia gravis. Genes and Immunity. Functional annotation of noncoding sequence variants. Nature Methods. A general framework for estimating the relative pathogenicity of human genetic variants. DANN: a deep learning approach for annotating the pathogenicity of genetic variants.
An integrative approach to predicting the functional effects of non-coding and coding sequence variation. Associating disease-related genetic variants in intergenic regions to the genes they impact.
PhenomeCentral: a portal for phenotypic and genotypic matchmaking of patients with rare genetic diseases. Hum Mutat. Using ontologies to describe mouse phenotypes.
Genome biology. View Article Google Scholar The anatomy of phenotype ontologies: principles, properties and applications.
Briefings in Bioinformatics. Uberon, an integrative multi-species anatomy ontology. Genome Biology. PhenomeNET: a whole-phenome approach to disease gene discovery. Nucleic Acids Res.
Abstract Purpose: To characterize uptake of 1-aminofluorine fluorocyclobutanecarboxylic acid 18F FACBC in patients with localized prostate cancer, benign prostatic hyperplasia BPH , and normal prostate tissue and to evaluate its potential utility in delineation of intraprostatic cancers in histopathologically confirmed localized prostate cancer in comparison with magnetic resonance MR imaging. Issue Section:. Hohenberger, "Improved proxy re-encryption schemes with applications to secure distributed storage," ACM Transactions on Information and System Security, vol. A muscle at rest and using no ATP has very low respiratory rate. Advance article alerts.
Integrating phenotype ontologies across multiple species. Genome Biol. Gkoutos GV, Hoehndorf R. Ontology-based cross-species integration and analysis of Saccharomyces cerevisiae phenotypes. Journal of Biomedical Semantics. Bioinformatics of Behavior: Part 1. Academic Press; An integrative, translational approach to understanding rare and orphan genetically based diseases. Interface Focus. Identifying aberrant pathways through integrated analysis of knowledge in pharmacogenomics.
Mouse model phenotypes provide information about human drug targets. The American Journal of Human Genetics.
Genomic and Personalized Medicine, Second Edition — winner of a Volume 1 Genomic, Personalized Medicine and Public Health. Genomic and Personalized Medicine, Second Edition ― winner of a Highly . I recently obtained this two volume set (although not from Amazon) as a.
Improved exome prioritization of disease genes through cross-species phenotype comparison. Genome Res. ClinVar: public archive of relationships among sequence variation and human phenotype. Nucleic Acids Research. The Genomes Project Consortium. A global reference for human genetic variation. The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data.
Smedley D, Robinson PN. Phenotype-driven strategies for exome prioritization of human Mendelian disease genes. Genome Medicine.